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Rise of Ketone α-Hydrolysis.. Revisiting SNAcyl, E1cB Mechanisms and Carbon-Based Leaving Groups in One Reaction for Drug-Targeting Applications

Research Abstract

Nucleophilic substitution of carbon-leaving groups (CLGs) and base-catalyzed alcohol dehydration reactions are rare in the organic chemistry literature. Herein, we introduce an unprecedented example of a novel reaction that challenges the poor leaving group abilities of both CLGs and hydroxide ions via a concerted transition state, demonstrating E1cBanion step-2/SNAcyl step-1 reaction mechanism interference, displayed by S1 and S2 scaffolds in an alkaline medium (Schemes 5,8). The work offers swift access to C–C bond hydrolysis in the form of ketone α-hydrolytic cleavage under environmentally convenient conditions. Three reaction products were characterized by single-crystal X-ray crystallography, which supported their computed most stable ring conformer structures. Experimental and DFT evidence evoke fast reaction rates (TS1′, ΔG = 26.8 kcal/mol, Scheme 5 and TS5b, ΔG = 14.9 kcal/mol …

Research Authors
Raed M Maklad, Islam S Marae, Omaima F Ibrahim, Shaaban K Mohamed, Etify A Bakhite, Walid Sharmoukh
Research Date
Research Department
Research Journal
The Journal of Organic Chemistry
Research Publisher
American Chemical Society
Research Vol
Vol 90, Issue 23
Research Website
https://scholar.google.com.eg/scholar?oi=bibs&cluster=11277536256306513641&btnI=1&hl=en
Research Year
2025

Development a spectrofluorometric micellar supported encapsulated method for micro determination of silver ion using new 2,6-disubstituted pyridine derivatives

Research Abstract

Herein, the presented manuscript provides for an extensive spectrofluorimetric method for micro determination of silver ion. This established method based on the use of the three synthesized 2,6-disubstituted pyridine derivatives (R1, R2 and R3) through exploiting their high fluorescence emission property. A noticeable effect on the fluorescence emission of the reagents after chelation with Ag (I) was monitored. Its noteworthy that the sensitivity and stability of this method was increased by using micellar medium. After chelation with Ag(I), the fluorescence emission of the ligands R1 and R2 were effectively quenched in a regular manner by increasing Ag(I) concentration. In contrast, an increase of the fluorescence intensity for reagent R3 after addition of Ag (I) was observed. The solvatochromism for all reagents under investigation was examined in different solvent. Furthermore, the chelation between Ag(I) and the and designed pyridine reagents was assessed spectrophotometrically. The optimum conditions for the most stable complexes which give a high signal difference were explored and well-determined. The linear range for determination of silver ion were determined and found to be 0.18–1.16, 0.06–0.59 and 0.18–1.43 μg mL−1 for R1, R2 and R3, respectively. The statistical analytical parameters such as LOD, LOQ, SD of slope, SD of intercept and RDS were calculated. In addition, the developed methods were efficaciously applied for determination of Ag(I) in some water samples. These selective complexation methods found to be in good precision compared to official and reported method as revealed F-test.

Research Date
Research Department
Research Journal
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Research Publisher
Elsevier
Research Rank
Q1
Research Vol
Volume 242
Research Website
https://doi.org/10.1016/j.saa.2020.118711 Get rights and content
Research Year
2020

Unprecedented Regio- and Stereoselective Synthesis of Pyrene-Grafted Dispiro[indoline-3,2′-pyrrolidine-3′,3″-indolines]: Expedient Experimental and Theoretical Insights into Polar [3 + 2] Cycloaddition

Research Abstract

A series of dispiro[indoline-3,2′-pyrrolidine-3′,3″-indolines] was synthesized via a multicomponent polar [3 + 2] cycloaddition (32CA) reaction of isatin derivatives, sarcosine and (E)-3-(2-oxo-2-(pyren-1-yl)ethylidene)indolin-2-one derivatives. The regio- and stereochemistries of the cycloadducts were established on the basis of one-dimensional (1D) (1H-, 13C-, 13C-CRAPT NMR) and two-dimensional (2D) homonuclear and heteronuclear correlation NMR spectrometry experiments (1H–1H gDQFCOSY, 13C–1H-HSQCAD, 13C–1H-HMBCAD, 1H–1H-ROESYAD). The molecular mechanism and regio- and stereoselectivities of the cycloaddition (CA) reaction have been investigated utilizing a density functional theory (DFT) method and were thoroughly explained based on the transition-state stabilities and global/local electrophilicity/nucleophilicity reactivity indices of the reactants.

Research Date
Research Department
Research Journal
ACS omega
Research Pages
24081–24094
Research Publisher
American Chemical Society
Research Rank
Q2
Research Vol
Volume 5
Research Website
https://doi.org/10.1021/acsomega.0c03510
Research Year
2020

Distinctive tunable photophysical properties of versatile environmentally-sensitive tribranched cyanopyridine fluorophores

Research Abstract

In the present work, twenty-four environmentally-sensitive cyanopyridine fluorophores bearing pyrene and/ or fluorene with different para-substituted-phenyl moieties that have been previously designed and synthesized by us are studied in depth for their photophysical properties. Initially, the optical performances of the compounds were investigated by employing UV–visible and fluorescence spectroscopic tools in various aprotic and protic solvents. All the compounds exhibited absorption bands between 310 and 452 nm, and emission bands between 454 and 633 nm. High sensitivity emission spectra with solvents of different polarities were recorded and studied. The fluorescence quantum yield (ϕf) increased in solvents of low polarity and decreased on increasing the polarity of solvents. On the other hand, in case of strong electron donating (–NMe2) and strong electron attracting (–CN) substitution, a pronounced increase in Stokes shifts (up to 252 nm, 14250 cm−1) were recorded. Lippert-Mataga and Reichardts correlations, applied for estimating the variation in dipole moments (Δμ), suggested that the emissive state of designed fluorescence 3-cyanopyridine derivatives is of strong ICT character. The aprotic and protic solvents gave a linear plot for the Stokes shifts in a Lippert–Mataga plot, which appeared as two distinct domains in ET(30) scales indicating the presence of hydrogen bondings. It was observed that for compounds 5b – 8b, with (-NMe2) group on the skeleton of phenyl ring, the Lippert-Mataga and Reichardt–Dimroth’s plots deviated from linearity signifying that 5b – 8b molecules were involved in specific interaction with protic solvents.

Research Date
Research Department
Research Journal
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Research Publisher
Elsevier
Research Rank
Q1
Research Vol
Volume 248
Research Website
https://doi.org/10.1016/j.saa.2020.119169
Research Year
2021

Synthesis and characterization of heterocyclic compounds incorporating 2-pyrazoline and 1, 3-thiazol-4-one moieties with antimicrobial significance

Research Abstract

The current study describes the synthesis of heterocycles incorporating 2-pyrazoline and 1,3-thiazol-4-one moieties. The cycloaddition of thiosemicarbazide with diverse chalcones afforded N-thiocarbamoyl pyrazolines, which then reacted with chloroacetic acid to yield 2-pyrazolinyl-1,3-thiazol-4(5H)-ones. The active methylene group at position 5 of the synthesized thiazolones increases its reactivity with aromatic aldehydes, forming the arylidene derivatives. The chemical structures of these compounds were determined through spectral and elemental analyses. Additionally, the compounds were assessed for the antibacterial effectiveness against both Gram-positive and Gram-negative bacteria, as well as against specific species of fungi.

Research Authors
Mustafa A Fawzy, Ahmed Abdou O Abeed
Research Date
Research Department
Research Journal
ARKIVOC
Research Publisher
ARKAT USA INC
Research Year
2025

Multicomponent synthesis, cytotoxicity, and computational studies of novel imidazopyridazinebased N-phenylbenzamides

Research Abstract

A one-pot multicomponent synthesis and application of new imidazopyridazine based N-phenylbenzamides is described. An atom-economical method involving dimethyl phthalate, substituted anilines, and pyridazine-4,5-diamine provided the desired compounds in 120–150 min with 80–85% yield. The reaction was catalyzed with phosphoric acid, and glycerol was used as a safer, greener solvent. Anticancer evaluation against selected cancer cell lines revealed that compound 4e was the most active from the series and exhibited IC50 values below 9.1 µM. Compounds 4h and 4d also displayed good and comparable IC50 values (10.2–12.1 µM). Molecular docking and molecular dynamic studies showed that compound 4e exhibit good binding affinity and stable complex formation with ABL1-kinase protein, respectively. Additional computational predictions such as ADME and drug-likeness demonstrated the potential of the new benzamides as leads for further development.

Research Date
Research Department
Research Journal
Journal of Saudi Chemical Society
Research Publisher
Elsevier
Research Rank
Q2
Research Vol
Volume 26
Research Website
https://doi.org/10.1016/j.jscs.2022.101449
Research Year
2022

New Imidazole-Based N-Phenylbenzamide Derivatives as Potential Anticancer Agents: Key Computational Insights

Research Abstract

An efficient atom-economical synthetic protocol to access new imidazole-based
N-phenylbenzamide derivatives is described. A one-pot three-component reaction was
utilized to provide a series of N-phenylbenzamide derivatives in a short reaction time (2–4 h)
with an 80–85% yield. The cytotoxic evaluation revealed that derivatives 4e and 4f
exhibited good activity, with IC50 values between 7.5 and 11.1 μM against the tested
cancer cell lines. Computational studies revealed interesting insights: the docking of the
active derivatives (4e and 4f) showed a higher affinity toward the target receptor protein
than the control. Molecular dynamic simulations revealed that the active derivatives form
stable complexes with the ABL1 kinase protein. Moreover, the ADME and drug-likeness of
the derivatives reinforced the potential of the derivatives to be taken up for further
development as anticancer agents.

Research Date
Research Department
Research Journal
Frontiers in Chemistry
Research Publisher
Frontiers
Research Rank
Q2
Research Vol
Volume 9
Research Website
https://doi.org/10.3389/fchem.2021.808556
Research Year
2022

Spectroscopic, computational and mechanistic studies on regio- and stereoselectivity of the 1,3-dipolar cycloaddition reaction in the synthesis of dispiro[indoline-3,2' -pyrrolidine-3',3"-indolines] festooned with pyrene moiety

Research Abstract

An efficient and catalyst-free multicomponent sequence for synthesizing fused new polyheterocyclic pyrene-grafted dispiro-pyrrolidine oxindolines through 1,3-dipolar cycloaddition reaction mediated by non-stabilized azomethine ylides is reported herein. The regio- and stereochemistry of the cycloadducts were determined on the basis of one-dimensional (1D) and two-dimensional (2D) homonuclear and het- eronuclear correlation NMR spectroscopy. The mechanism of the cycloaddition reaction, as well as regios- electivity were discussed by evaluating global and local electrophilicity and nucleophilicity descriptors at B3LYP/6-31G level of theory. The findings suggested that the polarity and charge transfer flow be- tween azomethine ylides (dipole) and 5-chloro-3-(2-oxo-2-(pyren-1-yl)ethylidene)indolin-2-ones (dipo- larophiles) was consistent with the global reactivity descriptors and substitutional pattern. These out- comes based on local descriptors Parr functions proposed by Domingo were found to be quite promising indices for the study of organic reactivity and to explain the regioselectivity of cycloaddition processes.

Research Date
Research Department
Research Journal
Journal of Molecular Structure
Research Publisher
Elsevier
Research Rank
Q2
Research Vol
Volume 1264
Research Website
https://doi.org/10.1016/j.molstruc.2022.133283
Research Year
2022

Reservoir characterization and facies modeling of the gas-bearing Kafr El Sheikh and Abu Madi reservoirs in the Disouq Field, Nile delta, Egypt: An integrated petrophysical, pressure, and seismic study

Research Abstract
Kafr El Sheikh (KES) and Abu Madi formations are among the potential gas-producing reservoirs in the Nile Delta, promoting numerous efforts to characterize them. Based on a full set of conventional well log data from four wells in the Disouq Field in the northwestern Desert, the petrophysical properties and hydrocarbon potentiality of these two formations were figured out. When litho-saturation, neutron-density, and M-N plots are integrated together, they show that the two studied reservoirs are mostly made up of shale with some sand lenses and lobes that could be potential reservoirs. We further subdivide the KES Formation into KES IIIA, KES IIIB, KES IIIC, and KES IIID based on the petrophysical data. The petrophysical parameters of both the Abu Madi Formation (7.77 m net-pay 13.72 m, 20.8% ∅e 25.8%, 34.4% Sw 51.8%, and 20.3% Vsh 22.6%) and the KES Formation (1.98 m net-pay 10.0 m, 23.1% ∅e 25.3%, 29.5% Sw 42.4%, and 29.0% Vsh 32.0%) indicate a high potentiality for these two reservoirs. The seismic data revealed the existence of an E-W trending 4-way dip closure and a major N-S normal fault that intersects the field, forming an anticline in its upper block. The pressure data from the repeat formation tester (RFT) helped figure out the free water level (FWL) between the gas and water aquifer at depths of 7296 ft and 7850 ft for the DSQ 1–3 and DSQ 1–5 wells. In the DSQ-2X well, the water is found at a shallower depth interval (upper compartment at 1943–2170 m depth interval) than in two deeper gas-bearing reservoirs (middle and lower compartments at 2170–2230 m and 2230–2270 m depth intervals), which means that there are three separate compartments. The integration between the well log and seismic data enabled more detailed delineation for the complex structural setting of the field and detailed characterization for its reservoir and petrophysical properties. This study is applicable to the similar 4-way dip closure, which is dominant in the Nile Delta and other similar prograding river-dominated deltas. Analogous sequences in deltaic and nearshore areas in Africa and worldwide can utilize the applied workflow.
Research Authors
Mennat Allah Nafady a, Munir Elmahdy b,*, Ahmed A. Radwan c, Bassem S. Nabawy d, Ahmed Abdelhady e, Abdalla Mousa El-Ayyat a, Ezzat A. Ahmed a
Research Date
Research Department
Research Journal
Journal of African Earth Sciences
Research Pages
22
Research Publisher
Journal of African Earth Sciences
Research Rank
2
Research Website
www.elsevier.com/locate/jafrearsci
Research Year
2025
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