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Nucleophilicity and solvent effects on the kinetics of 4-(pyren-1-yl)thiazol-2-amine interaction with 4,6-dinitrobenzofuroxan

Research Abstract

A multistep synthesis of novel pyrene-based thiazole moiety been has been realized following some synthetic challenges and complications. The chemical structure of the synthesized compound has been established on the basis of both spectroscopic and analytical tools. Its nucleophilic reactivity with 4,6-dinitrobenzofuroxan (DNBF) has been successfully studied in solution. A kinetic study of the covalent electrophile/nucleophile combination of dinitrobenzofuroxan (DNBF, electrophile) and 4-(pyren-1-yl)thiazol-2-amine (nucleophile) resulting in the formation of the corresponding σ-adduct in solution is reported. The rate constant (k1) of the second-order relating to the Csingle bondC bond forming step of this complexation process has been found to fit into the linear correlation log k = sN (N + E), thereby permitting the evaluation of the nucleophilicity parameter (N) of the 4-(pyren-1-yl)thiazol-2-amine. 4-(Pyren-1-yl)thiazol-2-amine has been subsequently ranked according to its reactivity profile on the general nucleophilicity scale developed recently by Mayr et al., leading to an interesting and direct comparison over a large domain of π-, σ-, and n-nucleophiles.

Research Date
Research Department
Research Journal
Arabian Journal of Chemistry
Research Pages
3702-3713
Research Publisher
Elsevier
Research Rank
Q2
Research Vol
Volume 13
Research Website
https://doi.org/10.1016/j.arabjc.2019.12.016
Research Year
2020

Tailoring of novel biologically active molecules based on N4-substituted sulfonamides bearing thiazole moiety exhibiting unique multi-addressable biological potentials

Research Abstract

Nowadays, the growth of drug-resistant microbial strains (MDRs) is a serious public health threat worldwide. Moreover, tens of millions of people are annually diagnosed with cancer worldwide, and more than half of patients ultimately die. In the present study, a new series of 2-(4-substituted-thiazol-2-ylamino)acetamides and N-(4-substituted-thiazol-2-yl)acetamides incorporating sulfonamide moieties were designed, synthesized, well-characterized and successfully evaluated for their antimicrobial activity against multidrug resistant strains and screened for cytotoxic activity against normal lung fibroblast (WI-38), human lung carcinoma (A549), and human breast carcinoma (MDA-MB-231) cell lines. Fluorescence-activated cell sorting (FACS) analysis and molecular modeling study were performed to identify the mode of action of the novel synthesized compounds and their binding interactions with the active sites of dihydrofolate reductase enzyme (DHFR).

Research Date
Research Department
Research Journal
Arabian Journal of Chemistry
Research Pages
5345-5362
Research Publisher
Elsevier
Research Rank
Q2
Research Vol
Volume 13
Research Website
https://doi.org/10.1016/j.arabjc.2020.03.014
Research Year
2020

Bioactive Fluorenes. Part II. Unprecedented biologically active thiazole derivatives based-2,7-dichlorofluorene as competent DHFR inhibitors: Design, synthesis, and molecular docking approaches

Research Abstract

In this study, a new series of (4-(2,7-dichloro-9H-fluoren-4-yl)thiazol-yl)acetamide derivatives was synthesized, and the new heterocycles were completely characterized, evaluated for their antimicrobial activity, and screened for cytotoxic activity against human lung carcinoma (A-549) and human breast carcinoma (MCF-7) cell lines. A molecular docking study was undertaken to identify the possible mode of action of the synthesized compounds, which suggested binding interactions with the dihydrofolate reductase (DHFR) active sites.

Most of the synthesized compounds displayed meaningful activity against A-549 and MCF-7 cell lines when compared to 5-fluorouracil (5-FU), which was used as a reference drug. Furthermore, some of the prepared compounds exhibited potent antibacterial and antifungal activities. The highly pronounced biological activities of the compounds under investigation offer such species as promising future drug prospects which may find applications in the fields of biological and medicinal sciences.

Research Date
Research Department
Research Journal
Arabian Journal of Chemistry
Research Pages
5451-5462
Research Publisher
Elsevier
Research Rank
Q2
Research Vol
Volume 13
Research Website
https://doi.org/10.1016/j.arabjc.2020.03.024
Research Year
2020

Identifying and evaluating the hydrocarbon-bearing zones within the Cretaceous reservoirs using well logging data in El-Fayoum Concessions, Egypt

Research Authors
Mohamed Osman Ebraheem, Hamza Ibrahim, Ahmed Hosny Senosy
Research Date
Research Department
Research Journal
Discover Applied Sciences
Research Member
Research Pages
1116
Research Vol
7
Research Year
2025

Structure-reactivity relationships on Michael additions of secondary cyclic amines with 3-cyanomethylidene-2-oxindoline derivatives

Research Abstract

A kinetic study of the nucleophilic addition reactions of 3-cyanomethylidene-2-oxindoline derivatives with cyclic amines (namely: piperidine, morpholine and pyrrolidine) in MeCN solution at 20 °C is reported. The second-order rate constants showed of this process fit nicely the Brönsted equation log k1 = βnuc pKa + C, allowing the determination of the βnuc parameter in the range of 0.63 < βnuc < 0.77 that indicates that the degree of formation of N–C bond in the transition state is more half complete. Moreover, the analysis of the kinetic measurements based on a good linear log k (20 °C) = sN (E + N) free enthalpy relationship are used to assess the electrophilic reactivity in term of E parameter of these series of 2-oxindoline derivatives Michael acceptors. Of major interest is that the estimated E values were established to cover a domain of reactivity of ~3 units of E, ranging from −17.5 for 2-(5-chloro-2-oxindolin-3-ylidene)malononitrile (the most reactive electrophile) to −20.3 for ethyl 2-(5-chloro-1-methyl-2-oxindolin-3-ylidene)-2-cyanoacetate (the least reactive electrophile). The theoretical reactivity indices ω based on the conceptual Density Functional Theory (DFT) explains correctly the experimental electrophilicity E ordering founded in terms of experimental scales.

Research Date
Research Department
Research Journal
Arabian Journal of Chemistry
Research Pages
5487-5500
Research Publisher
Elsevier
Research Rank
Q2
Research Vol
Volume 13
Research Website
https://doi.org/10.1016/j.arabjc.2020.03.027
Research Year
2020

Bioactive fluorenes. Part III: 2,7-dichloro-9H-fluorene-based thiazolidinone and azetidinone analogues as anticancer and antimicrobial against multidrug resistant strains agents

Research Abstract

Background

Thiazoles, thiazolidinones and azetidinones are highly ranked amongst natural and synthetic heterocyclic derivatives due to their great pharmaceutical potential.

Results

New thiazolidinone and azetidinone class of bioactive agents based on 4-(2,7-dichloro-9H-fluoren-4-yl)thiazole moiety have been successfully synthesized. 4-(2,7-dichloro-9H-fluoren-4-yl)thiazol-2-amine was synthesized and allowed to react with various aryl/heteroaryl aldehydes to afford the corresponding Schiff base intermediates. The target thiazolidinone and azetidinone analogues have derived from Schiff bases by their reactions with thioglycolic acid and chloroacetyl chloride, respectively. The newly synthesized compounds were then evaluated for their antimicrobial activity against some multidrug resistant strains and examined for cytotoxic activity against normal lung fibroblast (WI-38), human lung carcinoma (A549), and human breast carcinoma (MDA-MB-231) cell lines to develop a novel class of fluorene-based bioactive agents. The mode of action and the binding interaction of the synthesized compound with the active sites of dihydrofolate reductase enzyme were well identified by fluorescence-activated cell sorting (FACS) analysis and molecular docking study.

Conclusion

Some of the synthesized compounds showed remarkable activity against A-549 and MDA-MB-231 when compared to Taxol, which was used as a reference drug. 2,7-dichloro-9H-fluorene-based azetidinones are more efficient as antimicrobial and anticancer agents compared to dichloro-9H-fluorene-based thiazolidinones derivatives.

Research Date
Research Department
Research Journal
BMC Chemistry
Research Publisher
Springer Nature
Research Rank
Q2
Research Vol
Volume 14
Research Website
https://doi.org/10.1186/s13065-020-00694-2
Research Year
2020

Rise of Ketone α-Hydrolysis.. Revisiting SNAcyl, E1cB Mechanisms and Carbon-Based Leaving Groups in One Reaction for Drug-Targeting Applications

Research Abstract

Nucleophilic substitution of carbon-leaving groups (CLGs) and base-catalyzed alcohol dehydration reactions are rare in the organic chemistry literature. Herein, we introduce an unprecedented example of a novel reaction that challenges the poor leaving group abilities of both CLGs and hydroxide ions via a concerted transition state, demonstrating E1cBanion step-2/SNAcyl step-1 reaction mechanism interference, displayed by S1 and S2 scaffolds in an alkaline medium (Schemes 5,8). The work offers swift access to C–C bond hydrolysis in the form of ketone α-hydrolytic cleavage under environmentally convenient conditions. Three reaction products were characterized by single-crystal X-ray crystallography, which supported their computed most stable ring conformer structures. Experimental and DFT evidence evoke fast reaction rates (TS1′, ΔG = 26.8 kcal/mol, Scheme 5 and TS5b, ΔG = 14.9 kcal/mol …

Research Authors
Raed M Maklad, Islam S Marae, Omaima F Ibrahim, Shaaban K Mohamed, Etify A Bakhite, Walid Sharmoukh
Research Date
Research Department
Research Journal
The Journal of Organic Chemistry
Research Publisher
American Chemical Society
Research Vol
Vol 90, Issue 23
Research Website
https://scholar.google.com.eg/scholar?oi=bibs&cluster=11277536256306513641&btnI=1&hl=en
Research Year
2025

Development a spectrofluorometric micellar supported encapsulated method for micro determination of silver ion using new 2,6-disubstituted pyridine derivatives

Research Abstract

Herein, the presented manuscript provides for an extensive spectrofluorimetric method for micro determination of silver ion. This established method based on the use of the three synthesized 2,6-disubstituted pyridine derivatives (R1, R2 and R3) through exploiting their high fluorescence emission property. A noticeable effect on the fluorescence emission of the reagents after chelation with Ag (I) was monitored. Its noteworthy that the sensitivity and stability of this method was increased by using micellar medium. After chelation with Ag(I), the fluorescence emission of the ligands R1 and R2 were effectively quenched in a regular manner by increasing Ag(I) concentration. In contrast, an increase of the fluorescence intensity for reagent R3 after addition of Ag (I) was observed. The solvatochromism for all reagents under investigation was examined in different solvent. Furthermore, the chelation between Ag(I) and the and designed pyridine reagents was assessed spectrophotometrically. The optimum conditions for the most stable complexes which give a high signal difference were explored and well-determined. The linear range for determination of silver ion were determined and found to be 0.18–1.16, 0.06–0.59 and 0.18–1.43 μg mL−1 for R1, R2 and R3, respectively. The statistical analytical parameters such as LOD, LOQ, SD of slope, SD of intercept and RDS were calculated. In addition, the developed methods were efficaciously applied for determination of Ag(I) in some water samples. These selective complexation methods found to be in good precision compared to official and reported method as revealed F-test.

Research Date
Research Department
Research Journal
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Research Publisher
Elsevier
Research Rank
Q1
Research Vol
Volume 242
Research Website
https://doi.org/10.1016/j.saa.2020.118711 Get rights and content
Research Year
2020

Unprecedented Regio- and Stereoselective Synthesis of Pyrene-Grafted Dispiro[indoline-3,2′-pyrrolidine-3′,3″-indolines]: Expedient Experimental and Theoretical Insights into Polar [3 + 2] Cycloaddition

Research Abstract

A series of dispiro[indoline-3,2′-pyrrolidine-3′,3″-indolines] was synthesized via a multicomponent polar [3 + 2] cycloaddition (32CA) reaction of isatin derivatives, sarcosine and (E)-3-(2-oxo-2-(pyren-1-yl)ethylidene)indolin-2-one derivatives. The regio- and stereochemistries of the cycloadducts were established on the basis of one-dimensional (1D) (1H-, 13C-, 13C-CRAPT NMR) and two-dimensional (2D) homonuclear and heteronuclear correlation NMR spectrometry experiments (1H–1H gDQFCOSY, 13C–1H-HSQCAD, 13C–1H-HMBCAD, 1H–1H-ROESYAD). The molecular mechanism and regio- and stereoselectivities of the cycloaddition (CA) reaction have been investigated utilizing a density functional theory (DFT) method and were thoroughly explained based on the transition-state stabilities and global/local electrophilicity/nucleophilicity reactivity indices of the reactants.

Research Date
Research Department
Research Journal
ACS omega
Research Pages
24081–24094
Research Publisher
American Chemical Society
Research Rank
Q2
Research Vol
Volume 5
Research Website
https://doi.org/10.1021/acsomega.0c03510
Research Year
2020

Distinctive tunable photophysical properties of versatile environmentally-sensitive tribranched cyanopyridine fluorophores

Research Abstract

In the present work, twenty-four environmentally-sensitive cyanopyridine fluorophores bearing pyrene and/ or fluorene with different para-substituted-phenyl moieties that have been previously designed and synthesized by us are studied in depth for their photophysical properties. Initially, the optical performances of the compounds were investigated by employing UV–visible and fluorescence spectroscopic tools in various aprotic and protic solvents. All the compounds exhibited absorption bands between 310 and 452 nm, and emission bands between 454 and 633 nm. High sensitivity emission spectra with solvents of different polarities were recorded and studied. The fluorescence quantum yield (ϕf) increased in solvents of low polarity and decreased on increasing the polarity of solvents. On the other hand, in case of strong electron donating (–NMe2) and strong electron attracting (–CN) substitution, a pronounced increase in Stokes shifts (up to 252 nm, 14250 cm−1) were recorded. Lippert-Mataga and Reichardts correlations, applied for estimating the variation in dipole moments (Δμ), suggested that the emissive state of designed fluorescence 3-cyanopyridine derivatives is of strong ICT character. The aprotic and protic solvents gave a linear plot for the Stokes shifts in a Lippert–Mataga plot, which appeared as two distinct domains in ET(30) scales indicating the presence of hydrogen bondings. It was observed that for compounds 5b – 8b, with (-NMe2) group on the skeleton of phenyl ring, the Lippert-Mataga and Reichardt–Dimroth’s plots deviated from linearity signifying that 5b – 8b molecules were involved in specific interaction with protic solvents.

Research Date
Research Department
Research Journal
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Research Publisher
Elsevier
Research Rank
Q1
Research Vol
Volume 248
Research Website
https://doi.org/10.1016/j.saa.2020.119169
Research Year
2021
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