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Production and development of novel drug targets through AI

Research Abstract

We all know that the drug discovery process takes years to discover a new drug. Identifying potential drug targets requires years of preclinical research to identify and validate the most promising targets. Artificial intelligence (AI) has emerged as a potent tool for harnessing anthropomorphic knowledge and providing quick solutions to complex problems. Amazing advancements in AI technology and machine learning (ML) present a game-changing opportunity to increase efficiency and accuracy in drug discovery and development. Researchers can identify disease-associated targets and predict their interactions with potential drugs by using AI algorithms that analyse large amounts of biological data, such as genomics and proteomics. This allows for a more efficient and targeted approach to drug discovery from microbes, increasing the likelihood of drug approval success. ML algorithms can predict the bioactivity and toxicity of drug candidates and aid in experimental design. Besides, AI can aid in predicting the mechanism of action, adverse reactions and also play a great role in designing clinical trials and predicting the outcomes. This capability enables lead compound prioritization and optimization, reducing the need for extensive and costly animal testing. AI algorithms can help with personalized medicine approaches, resulting in more effective treatment outcomes and improved patient adherence. This chapter discusses the diverse applications of AI and ML to improve the efficiency of drug discovery, drug screening, designing drug molecules, prediction of the mechanism of action, prediction of the maintenance and quality control, prediction of adverse events, and clinical trial design.

Research Authors
Ghada Abd-Elmonsef Mahmoud
Research Date
Research Journal
Methods in Microbiology
Research Member
Research Publisher
َ@ ELSIEVER
Research Rank
International
Research Vol
55
Research Website
https://www.sciencedirect.com/science/article/abs/pii/S0580951724000175?via%3Dihub
Research Year
2024

Kinetic studies on optimized extracellular laccase from Trichoderma harzianum PP389612 and its capabilities for azo dye removal

Research Abstract

Background

Azo dyes represent a common textile dye preferred for its high stability on fabrics in various harsh conditions. Although these dyes pose high-risk levels for all biological forms, fungal laccase is known as a green catalyst for its ability to oxidize numerous dyes.

Methods

Trichoderma isolates were identified and tested for laccase production. Laccase production was optimized using Plackett–Burman Design. Laccase molecular weight and the kinetic properties of the enzyme, including Km and Vmax, pH, temperature, and ionic strength, were detected. Azo dye removal efficiency by laccase enzyme was detected for Congo red, methylene blue, and methyl orange.

Results

Eight out of nine Trichoderma isolates were laccase producers. Laccase production efficiency was optimized by the superior strain T. harzianum PP389612, increasing production from 1.6 to 2.89 U/ml. In SDS-PAGE, purified laccases appear as a single protein band with a molecular weight of 41.00 kDa. Km and Vmax values were 146.12 μmol guaiacol and 3.82 μmol guaiacol/min. Its activity was stable in the pH range of 5–7, with an optimum temperature range of 40 to 50 °C, optimum ionic strength of 50 mM NaCl, and thermostability properties up to 90 °C. The decolorization efficiency of laccase was increased by increasing the time and reached its maximum after 72 h. The highest efficiency was achieved in Congo red decolorization, which reached 99% after 72 h, followed by methylene blue at 72%, while methyl orange decolorization efficiency was 68.5%.

Conclusion

Trichoderma laccase can be used as an effective natural bio-agent for dye removal because it is stable and removes colors very well.

Research Authors
Amira Saad Abd El-latif, Abdel-Naser A. Zohri, Hamdy M. El-Aref & Ghada Abd-Elmonsef Mahmoud
Research Date
Research Journal
Microbial Cell Factories
Research Pages
150
Research Publisher
@ Springer
Research Rank
International Q1
Research Vol
23
Research Website
https://microbialcellfactories.biomedcentral.com/articles/10.1186/s12934-024-02412-2
Research Year
2024

Optimization of the New Designed FEL Beam Transport Line

Research Authors
K. Yoshida, H. Zen, K. Okumura, K. Shimahashi, M. Shibata, T. Komai, H. Imon, H. Negm, M. Omer, Y.-W. Choi, R. Kinjo, T. Kii, K Masuda, H. Ohgaki
Research Date
Research Department
Research Journal
Zero-Carbon Energy Kyoto 2012.
Research Member
Research Pages
205 – 216
Research Publisher
Springer
Research Vol
Chapter 22
Research Website
https://doi.org/10.1007/978-4-431-54264-3_22
Research Year
2012

NUMERICAL STUDY ON ELECTRON BEAM PROPERTIES IN TRIODE TYPE THERMIONIC RF GUN

Research Authors
K. Mishima, K. Torgasin, K. Masuda, M. Inukai, K. Okumura, H. Negm, M. Omer, K. Yoshida, H. Zen, T. Kii, H. Ohgaki
Research Department
Research Journal
Proc. of FEL2013, New York, NY, US
Research Member
Research Pages
344-347
Research Publisher
FEL Proc. USA
Research Website
https://accelconf.web.cern.ch/fel2013/papers/tupso50.pdf
Research Year
2013

Active Interrogation of Nuclear Materials Using LaBr3: Ce Detectors

Research Authors
M. Omer, H. Negm, H. Zen, T. Hori, T. Kii, K. Masuda, H. Ohgaki, R. Hajima, T. Hayakawa, T. Shizuma, M. Fujiwara, S.H. Park, N. Kikuzawa, G. Rusev, A.P. Tonchev, Y.K. Wu
Research Date
Research Department
Research Journal
Energy Procedia
Research Member
Research Pages
50–56
Research Publisher
Elsevier
Research Vol
34
Research Website
https://doi.org/10.1016/j.egypro.2013.06.732
Research Year
2013

Experimental demonstration of mode-selective phonon excitation of 6H-SiC by a mid-infrared laser with anti-Stokes Raman scattering spectroscopy

Research Authors
K. Yoshida, T. Sonobe, H. Zen, K. Hachiya, K. Okumura, K. Mishima, M. Inukai, H. Negm, K. Torgasin, M. Omer, T. Kii, K. Masuda, H. Ohgaki
Research Date
Research Department
Research Journal
Appl. Phys. Lett.
Research Member
Research Pages
182103
Research Publisher
AIP
Research Vol
103
Research Website
https://doi.org/10.1063/1.4827253
Research Year
2013

Performance of LaBr3(Ce) array detector system for non-destructive inspection of special nuclear material by using nuclear resonance fluorescence

Research Authors
M. Omer, H. Ohgaki, H. Negm, I. Daito, T. Hori, T. Kii, H. Zen, R. Hajima, T. Hayakawa, T. Shizuma, M. Fujiwara
Research Date
Research Department
Research Journal
Proc. of IEEE HST 2013 USA
Research Member
Research Pages
671–676
Research Publisher
IEEE
Research Website
https://doi.org/10.1109/THS.2013.6699084
Research Year
2014

Investigation of Electron Beam Parameter in Seeded THz-FEL Amplifier using Photocathode RF Gun

Research Authors
Kyohei Shimahashi, Heishun Zen, Kensuke Okumura, Marie Shibata, Hidekazu Imon, Torgasin Konstantin, Hani Negm, Mohamed Omer, Kyohei Yoshida, Yong-Woon Choi, Ryota Kinjo, Kai Masuda, Toshiteru Kii, Hideaki Ohgaki
Research Date
Research Department
Research Journal
Energy Procedia
Research Member
Research Pages
863-870
Research Publisher
Elsevier
Research Vol
34
Research Website
https://doi.org/10.1016/j.egypro.2013.06.823
Research Year
2013
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