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Physio-chemical characteristics and bacterial diversity in copper mining wastewater based on 16S rRNA gene analysis

Research Abstract
Abstract The effects of seasonal change in temperature on the chemical compositions of water and bacterial diversity in copper mining wastewater reservoir (CMWR) located in Jiangxi province, China, was investigated. Wastewater samples were collected collected in December 2008 and May 2009 from different points of CMWR and analyzed for anions, heavy metals, and microbial community structure using standard procedures. Most of the parameters exceeded the limits set by the Chinese government. However, the concentrations of some selected parameters such as pH, BOD, DO, and DOC and heavy metals were significantly (P=0.05) varied and exhibited a reduction from the inlet to the outlet of CMWR. Bacterial diversity was studied by the combined polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) and cloning approach. The PCR-DGGE profiles showed the presence of 10 common bands in the seasonal samples of the reservoir indicating the high similarities among the bacterial populations existing during the two seasons. Furthermore, the DGGE profiles also evidenced the existence of some unique bands suggesting that the differences in bacterial diversity may be caused by the different environmental conditions. 22 major bands from the DGGE profiles were further reamplified, cloned, and sequenced. The results of sequencing analysis indicated the presence of Rheinheimera sp., Acidithiobacillus ferrooxidans, Afipia sp. and Burkholderia sp. as the dominant bacterial species in the CMWR samples. The Afipia sp. and Burkholderia sp. were found in summer samples only while most of the other species were common in both the seasons. Finally, the Copper mine wastewater was deficient in nutrients but enriched with the bacterial diversity of the extremophiles.
Research Authors
Islam Islam-ud-din, Sardar Khan, Abd El-latif Hesham, Ayaz Ahmad, Su Houbo, Cang Daqiang
Research Department
Research Journal
African Journal of Biotechnology
Research Member
Abd El-Latif Hesham
Research Pages
7891-7899
Research Publisher
NULL
Research Rank
1
Research Vol
Vol 9, No 46
Research Website
https://www.ajol.info/index.php/ajb/article/view/127219
Research Year
2010

Molecular genetic identification of yeast strains isolated from Egyptian soils for solubilization of inorganic phosphates and growth promotion of corn plants.

Research Abstract
Abstract Forty yeast strains isolated from soils taken from different locations in Egypt were tested for their P-solubilizing activities on the basis of analyzing the clear zone around colonies growing on a tricalcium phosphate medium after incubation for 5 days at 25degreesC, denoted as the solubilization index (SI). Nine isolates that exhibited P-solubilization potential with an SI ranging from 1.19 to 2.76 were genetically characterized as five yeasts belonging to the genus Saccharomyces cerevisiae and four non-Saccharomyces, based on a PCR analysis of the ITS1-26S region amplied by SC1/SC2 species-specific primers. The highest Psolubilization efficiency was demonstrated by isolate PSY- 4, which was identified as Saccharomyces cerevisiae by a sequence analysis of the variable D1/D2 domain of the 26S rDNA. The effects of single and mixed inoculations with yeast PSY-4 and Bacillus polymyxa on the P-uptake and growth of corn were tested in a greenhouse experiment using different levels of a phosphorus chemical fertilizer (50, 100, and 200 kg/ha super phosphate 15.5% P2O5). The results showed that inoculating the corn with yeast PSY-4 or B. polymyxa caused significant increases in the shoot and root dry weights and P-uptake in the shoots and roots. The P-fertilization level also had a significant influence on the shoot and root dry weights and P-uptake in the shoots and roots when increasing the P-level from 50 up to 200 kg/ha. Dual inoculation with yeast strain PSY-4 and B. polymyxa at a P-fertilization level of 200 kg/ha gave higher values for the shoot and root dry weights and P-uptake in the shoots and roots, yet these increases were nonsignificant when compared with dual inoculation with yeast strain PSY-4 and B. polymyxa at a P-fertilization level of 100 kg/ha. The best increases were obtained from dual inoculation with yeast strain PSY-4 and B. polymyxa at a P-fertilization level of 100 kg/ha, which induced the following percentage increases in the shoot and root dry weights, and P-uptake in the shoots and roots; 16.22%, 46.92%, 10.09%, and 31.07%, respectively, when compared with the uninoculated control (fertilized with 100 kg/ha).
Research Authors
Hesham A and Mohamed H
Research Department
Research Journal
Journal of Microbiology and Biotechnology
Research Pages
55-61.
Research Publisher
NULL
Research Rank
1
Research Vol
21(1)
Research Website
https://www.ncbi.nlm.nih.gov/pubmed/21301193
Research Year
2011

Molecular genetic identification of yeast strains isolated from Egyptian soils for solubilization of inorganic phosphates and growth promotion of corn plants.

Research Abstract
Abstract Forty yeast strains isolated from soils taken from different locations in Egypt were tested for their P-solubilizing activities on the basis of analyzing the clear zone around colonies growing on a tricalcium phosphate medium after incubation for 5 days at 25degreesC, denoted as the solubilization index (SI). Nine isolates that exhibited P-solubilization potential with an SI ranging from 1.19 to 2.76 were genetically characterized as five yeasts belonging to the genus Saccharomyces cerevisiae and four non-Saccharomyces, based on a PCR analysis of the ITS1-26S region amplied by SC1/SC2 species-specific primers. The highest Psolubilization efficiency was demonstrated by isolate PSY- 4, which was identified as Saccharomyces cerevisiae by a sequence analysis of the variable D1/D2 domain of the 26S rDNA. The effects of single and mixed inoculations with yeast PSY-4 and Bacillus polymyxa on the P-uptake and growth of corn were tested in a greenhouse experiment using different levels of a phosphorus chemical fertilizer (50, 100, and 200 kg/ha super phosphate 15.5% P2O5). The results showed that inoculating the corn with yeast PSY-4 or B. polymyxa caused significant increases in the shoot and root dry weights and P-uptake in the shoots and roots. The P-fertilization level also had a significant influence on the shoot and root dry weights and P-uptake in the shoots and roots when increasing the P-level from 50 up to 200 kg/ha. Dual inoculation with yeast strain PSY-4 and B. polymyxa at a P-fertilization level of 200 kg/ha gave higher values for the shoot and root dry weights and P-uptake in the shoots and roots, yet these increases were nonsignificant when compared with dual inoculation with yeast strain PSY-4 and B. polymyxa at a P-fertilization level of 100 kg/ha. The best increases were obtained from dual inoculation with yeast strain PSY-4 and B. polymyxa at a P-fertilization level of 100 kg/ha, which induced the following percentage increases in the shoot and root dry weights, and P-uptake in the shoots and roots; 16.22%, 46.92%, 10.09%, and 31.07%, respectively, when compared with the uninoculated control (fertilized with 100 kg/ha).
Research Authors
Hesham A and Mohamed H
Research Department
Research Journal
Journal of Microbiology and Biotechnology
Research Member
Abd El-Latif Hesham
Research Pages
55-61.
Research Publisher
NULL
Research Rank
1
Research Vol
21(1)
Research Website
https://www.ncbi.nlm.nih.gov/pubmed/21301193
Research Year
2011

Impacts of cell surface characteristics on population dynamics in a sequencing batch yeast reactor treating vegetable oil-containing wastewater

Research Abstract
Abstract Ten yeast strains acquired from different sources and capable of utilizing vegetable oil or related compounds (fatty acid or oleic acid) as sole carbon sources were inoculated into a sequencing batch reactor (SBR) for the treatment of high-strength vegetable oil-containing wastewater. The SBR system stably removed >89% of chemical oxygen demand (COD) and >99% of oil when fed with wastewater containing 15 g/L COD and 10 g/L oil in average. Denaturing gradient gel electrophoresis of polymerase chain reaction-amplified 26S rRNA genes showed that among the ten yeast strains, only Candida lipolytica, Candida tropicalis, and Candida halophila were dominant in the system. To elucidate the major factors affecting the selection of yeast strains in the SBR system, the three dominant strains were compared with two non-dominant strains in terms of COD removal performance, biomass yield, cell settleability, cell flocculation ability, cell emulsification ability, and surface hydrophobicity. Results showed that hydrophobicity and emulsification ability of yeast cells were the two most important factors determining the selection of yeast strains in the treatment of high-strength oil-containing wastewater.
Research Authors
Wenzhou Lv W, Hesham A, Zhang Y Liu X, Yang M.
Research Department
Research Journal
Applied Microbiology and Biotechnology
Research Member
Abd El-Latif Hesham
Research Pages
1785-1793
Research Publisher
Springer
Research Rank
1
Research Vol
90
Research Website
https://link.springer.com/article/10.1007/s00253-011-3206-6
Research Year
2011

Comparison of bacterial community structures in two systems of a sewage treatment plant using PCR-DGGE analysis.

Research Abstract
Abstract The combination of PCR amplification of 16S rRNA genes with denaturing gradient gel electrophoresis (DGGE) analysis was used to reveal the compositions and dynamics of bacterial communities in a sewage treatment plant with two systems, i.e., an anoxic-anaerobic-aerobic system (inverted A2O) and an anaerobic-anoxic-aerobic one (conventional A2O) over a period from February to July 2009, during which both systems experienced serious sludge bulking problems. The DGGE patterns showed that there were many common bands in both systems, suggesting the high similarity of bacterial communities of the two systems. Meanwhile, the moving window correlation analysis showed that the two systems experienced different microbial community structure changes during the period, which might be related with the different situations of the occurrence and disappearance of sludge bulking, as being reflected by sludge volume index (SVI) values. Major bands of DGGE patterns of sludge samples were further sequenced. Phylogenetic affiliation indicated that the majority of the sequences obtained were affiliated with Actinobacteria, Firmicutes, Bacteroidetes/Chlorobi group and α- and β-Proteobacteria. Two sequences showed high similarities to typical filamentous bacteria Microthrix parvicella and Nostocoida limicola I, indicating that these bacterial species have been involved in the sludge bulking problems.
Research Authors
Hesham A, Qi R, Yang M
Research Department
Research Journal
Journal of Environmental Sciences
Research Member
Abd El-Latif Hesham
Research Pages
Pages 2049-2054
Research Publisher
sciencedirect
Research Rank
1
Research Vol
Volume 23, Issue 12
Research Website
http://www.sciencedirect.com/science/article/pii/S100107421060647X
Research Year
2011

Molecular genetic differentiation of naturally isolated phosphorus solubilizing yeasts

Research Abstract
NULL
Research Authors
Rania F, Saleh FM, Hesham A., Mahmoud H, Hussein M
Research Department
Research Journal
Assiut Journal Agricultural science
Research Pages
258 - 271.
Research Publisher
NULL
Research Rank
2
Research Vol
NULL
Research Website
NULL
Research Year
2011

Molecular genetic differentiation of naturally isolated phosphorus solubilizing yeasts

Research Abstract
NULL
Research Authors
Rania F, Saleh FM, Hesham A., Mahmoud H, Hussein M
Research Department
Research Journal
Assiut Journal Agricultural science
Research Pages
258 - 271.
Research Publisher
NULL
Research Rank
2
Research Vol
NULL
Research Website
NULL
Research Year
2011

Molecular genetic differentiation of naturally isolated phosphorus solubilizing yeasts

Research Abstract
NULL
Research Authors
Rania F, Saleh FM, Hesham A., Mahmoud H, Hussein M
Research Department
Research Journal
Assiut Journal Agricultural science
Research Member
Research Pages
258 - 271.
Research Publisher
NULL
Research Rank
2
Research Vol
NULL
Research Website
NULL
Research Year
2011

Molecular genetic differentiation of naturally isolated phosphorus solubilizing yeasts

Research Abstract
NULL
Research Authors
Rania F, Saleh FM, Hesham A., Mahmoud H, Hussein M
Research Department
Research Journal
Assiut Journal Agricultural science
Research Member
Abd El-Latif Hesham
Research Pages
258 - 271.
Research Publisher
NULL
Research Rank
2
Research Vol
NULL
Research Website
NULL
Research Year
2011

Application of fluorescence in situ hybridization (FISH) to the analysis dynamics of sulfate reducing bacterial community in an oily bench scale reactor.

Research Abstract
Abstract Advances in the field of genomics and meta-genomics have led to rapid and accurate strategies for the monitoring of microbial biodiversity and have revealed its potential for biotechnological applications. In this study, fluorescent in situ hybridization (FISH) as a culture-independent molecular approach using specific CY3-labelled oligonucleotide probes was used to study the dynamics of the sulfate reduction bacterial community (SRB) of the activated sludge from an oily wastewater treatment system. The relative abundance of members of the dominant bacteria in the oily water reactor was determined by FISH for 16S rRNA using EUB338 probes, for detecting general eubacteria, and SRB385 for targeting SRBs and major species of delta-proteobacteria sulfate reducers. The percentage of cells hybridizing with probe EUB338 for the dominant bacteria decreased from 25.85 to 6.25%, while with the SRB385 probe for SRB bacteria, it increased from 7.21 to 10.20% of total cells during the reactor process. These data show that SRB bacteria dominated the active microbial community in the system. It is interesting that delta-proteobacterial SRBs occupied a high percentage and took place in an oily biological system under aerobic conditions.
Research Authors
Hesham A, and Saad A. Alamri
Research Department
Research Journal
African Journal of Biotechnology
Research Member
Abd El-Latif Hesham
Research Pages
pp. 10221-10226.
Research Publisher
NULL
Research Rank
1
Research Vol
Vol. 11(44)
Research Website
https://www.ajol.info/index.php/ajb/article/view/128326
Research Year
2012
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