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Relationship between Clinical and Environmental Isolates of Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
This study was conducted during the period from February 2010 to February 2011 to correlate the Acinetobacter baumannii strains isolated from clinical and environmental samples by different methods including biotyping, antibiogram, phenotyping (detection of metallo-B-lactamase enzyme) and also molecular typing throw detection of universal gene of Acinetobacter species. We isolated a total of 51 Acinetobacter species from clinical and environmental samples from different wards and ICUs of Assiut University Hospitals. Biotyping of the isolates were done using API 20NE Index system which identified all clinical & environmental isolatesas Acinetobacter baumannii / calcoaceticus complex. Antimicrobial susceptibility testing was determined by Kirby Bauer disk diffusion method. The highest resistance was to penicillin derivatives (66.7% and 51.9% in clinical and environmental samples respectively). The lowest resistance was to tetracycline (20.8% and 29.6%) and imipenem (29.2% and 33.3% in clinical and environmental samples respectively). Phenotypic detection of Metallo-B-lactamase (MBL) was done by double disc synergy test. All the imipenem resistant Acinetobacter baumannii strains isolated from clinical and environmental samples expressed MBL phenotypically. Molecular typing by PCR showed that 49 of Acinetobacter baumannii isolated from clinical and environmental samples had positive ITS of 602-622bp with an overall sequence similarity of more than96%.These methods supported a close relationship between clinical and environmental isolates and also indicated the important role of hospital environment in spread and transmissibility of multidrug resistant A. baumanii among hospitalized patients.
Research Authors
Enas A Daef, Ismael S Mohamad, Ahmad S Ahmad, Sherein G El-Gendy, Entsar H Ahmed, Ibrahim M Sayed
Research Journal
Journal of American Science
Research Member
Research Pages
67-73
Research Publisher
NULL
Research Rank
1
Research Vol
9(11s)
Research Website
J Am Sci 2013;9(11s):67-73]. (ISSN: 1545-1003). http://www.jofamericanscience.org.
Research Year
2013

Relationship between Clinical and Environmental Isolates of Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
This study was conducted during the period from February 2010 to February 2011 to correlate the Acinetobacter baumannii strains isolated from clinical and environmental samples by different methods including biotyping, antibiogram, phenotyping (detection of metallo-B-lactamase enzyme) and also molecular typing throw detection of universal gene of Acinetobacter species. We isolated a total of 51 Acinetobacter species from clinical and environmental samples from different wards and ICUs of Assiut University Hospitals. Biotyping of the isolates were done using API 20NE Index system which identified all clinical & environmental isolatesas Acinetobacter baumannii / calcoaceticus complex. Antimicrobial susceptibility testing was determined by Kirby Bauer disk diffusion method. The highest resistance was to penicillin derivatives (66.7% and 51.9% in clinical and environmental samples respectively). The lowest resistance was to tetracycline (20.8% and 29.6%) and imipenem (29.2% and 33.3% in clinical and environmental samples respectively). Phenotypic detection of Metallo-B-lactamase (MBL) was done by double disc synergy test. All the imipenem resistant Acinetobacter baumannii strains isolated from clinical and environmental samples expressed MBL phenotypically. Molecular typing by PCR showed that 49 of Acinetobacter baumannii isolated from clinical and environmental samples had positive ITS of 602-622bp with an overall sequence similarity of more than96%.These methods supported a close relationship between clinical and environmental isolates and also indicated the important role of hospital environment in spread and transmissibility of multidrug resistant A. baumanii among hospitalized patients.
Research Authors
Enas A Daef, Ismael S Mohamad, Ahmad S Ahmad, Sherein G El-Gendy, Entsar H Ahmed, Ibrahim M Sayed
Research Journal
Journal of American Science
Research Pages
67-73
Research Publisher
NULL
Research Rank
1
Research Vol
9(11s)
Research Website
J Am Sci 2013;9(11s):67-73]. (ISSN: 1545-1003). http://www.jofamericanscience.org.
Research Year
2013

Relationship between Clinical and Environmental Isolates of Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
This study was conducted during the period from February 2010 to February 2011 to correlate the Acinetobacter baumannii strains isolated from clinical and environmental samples by different methods including biotyping, antibiogram, phenotyping (detection of metallo-B-lactamase enzyme) and also molecular typing throw detection of universal gene of Acinetobacter species. We isolated a total of 51 Acinetobacter species from clinical and environmental samples from different wards and ICUs of Assiut University Hospitals. Biotyping of the isolates were done using API 20NE Index system which identified all clinical & environmental isolatesas Acinetobacter baumannii / calcoaceticus complex. Antimicrobial susceptibility testing was determined by Kirby Bauer disk diffusion method. The highest resistance was to penicillin derivatives (66.7% and 51.9% in clinical and environmental samples respectively). The lowest resistance was to tetracycline (20.8% and 29.6%) and imipenem (29.2% and 33.3% in clinical and environmental samples respectively). Phenotypic detection of Metallo-B-lactamase (MBL) was done by double disc synergy test. All the imipenem resistant Acinetobacter baumannii strains isolated from clinical and environmental samples expressed MBL phenotypically. Molecular typing by PCR showed that 49 of Acinetobacter baumannii isolated from clinical and environmental samples had positive ITS of 602-622bp with an overall sequence similarity of more than96%.These methods supported a close relationship between clinical and environmental isolates and also indicated the important role of hospital environment in spread and transmissibility of multidrug resistant A. baumanii among hospitalized patients.
Research Authors
Enas A Daef, Ismael S Mohamad, Ahmad S Ahmad, Sherein G El-Gendy, Entsar H Ahmed, Ibrahim M Sayed
Research Journal
Journal of American Science
Research Pages
67-73
Research Publisher
NULL
Research Rank
1
Research Vol
9(11s)
Research Website
J Am Sci 2013;9(11s):67-73]. (ISSN: 1545-1003). http://www.jofamericanscience.org.
Research Year
2013

Relationship between Clinical and Environmental Isolates of Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
This study was conducted during the period from February 2010 to February 2011 to correlate the Acinetobacter baumannii strains isolated from clinical and environmental samples by different methods including biotyping, antibiogram, phenotyping (detection of metallo-B-lactamase enzyme) and also molecular typing throw detection of universal gene of Acinetobacter species. We isolated a total of 51 Acinetobacter species from clinical and environmental samples from different wards and ICUs of Assiut University Hospitals. Biotyping of the isolates were done using API 20NE Index system which identified all clinical & environmental isolatesas Acinetobacter baumannii / calcoaceticus complex. Antimicrobial susceptibility testing was determined by Kirby Bauer disk diffusion method. The highest resistance was to penicillin derivatives (66.7% and 51.9% in clinical and environmental samples respectively). The lowest resistance was to tetracycline (20.8% and 29.6%) and imipenem (29.2% and 33.3% in clinical and environmental samples respectively). Phenotypic detection of Metallo-B-lactamase (MBL) was done by double disc synergy test. All the imipenem resistant Acinetobacter baumannii strains isolated from clinical and environmental samples expressed MBL phenotypically. Molecular typing by PCR showed that 49 of Acinetobacter baumannii isolated from clinical and environmental samples had positive ITS of 602-622bp with an overall sequence similarity of more than96%.These methods supported a close relationship between clinical and environmental isolates and also indicated the important role of hospital environment in spread and transmissibility of multidrug resistant A. baumanii among hospitalized patients.
Research Authors
Enas A Daef, Ismael S Mohamad, Ahmad S Ahmad, Sherein G El-Gendy, Entsar H Ahmed, Ibrahim M Sayed
Research Journal
Journal of American Science
Research Member
Research Pages
67-73
Research Publisher
NULL
Research Rank
1
Research Vol
9(11s)
Research Website
J Am Sci 2013;9(11s):67-73]. (ISSN: 1545-1003). http://www.jofamericanscience.org.
Research Year
2013

Relationship between Clinical and Environmental Isolates of Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
This study was conducted during the period from February 2010 to February 2011 to correlate the Acinetobacter baumannii strains isolated from clinical and environmental samples by different methods including biotyping, antibiogram, phenotyping (detection of metallo-B-lactamase enzyme) and also molecular typing throw detection of universal gene of Acinetobacter species. We isolated a total of 51 Acinetobacter species from clinical and environmental samples from different wards and ICUs of Assiut University Hospitals. Biotyping of the isolates were done using API 20NE Index system which identified all clinical & environmental isolatesas Acinetobacter baumannii / calcoaceticus complex. Antimicrobial susceptibility testing was determined by Kirby Bauer disk diffusion method. The highest resistance was to penicillin derivatives (66.7% and 51.9% in clinical and environmental samples respectively). The lowest resistance was to tetracycline (20.8% and 29.6%) and imipenem (29.2% and 33.3% in clinical and environmental samples respectively). Phenotypic detection of Metallo-B-lactamase (MBL) was done by double disc synergy test. All the imipenem resistant Acinetobacter baumannii strains isolated from clinical and environmental samples expressed MBL phenotypically. Molecular typing by PCR showed that 49 of Acinetobacter baumannii isolated from clinical and environmental samples had positive ITS of 602-622bp with an overall sequence similarity of more than96%.These methods supported a close relationship between clinical and environmental isolates and also indicated the important role of hospital environment in spread and transmissibility of multidrug resistant A. baumanii among hospitalized patients.
Research Authors
Enas A Daef, Ismael S Mohamad, Ahmad S Ahmad, Sherein G El-Gendy, Entsar H Ahmed, Ibrahim M Sayed
Research Journal
Journal of American Science
Research Pages
67-73
Research Publisher
NULL
Research Rank
1
Research Vol
9(11s)
Research Website
J Am Sci 2013;9(11s):67-73]. (ISSN: 1545-1003). http://www.jofamericanscience.org.
Research Year
2013

DESIGN AND SYNTHESIS OF SOME NEW 1, 2, 4-TRIAZOLE DERIVATIVES AS POTENTIAL ANTIBACTERIAL AGENTS

Research Abstract
Triazoles with different substituent groups are found to possess diverse applications in the field of medicinal chemistry. A new series of novel 1,3,5-trisubstituted[1,2,4]triazole derivatives, their Schiff bases and their amide derivatives were synthesized. Schiff bases (6-10) were prepared by the reaction of the triazoles amine 5 with equimolar amounts of the appropriate substituted benzaldehydes. The amide derivatives (25-39) were obtained by condensation of triazole amines (21-24) with the appropriate acid chloride. Chemical structures were confirmed by IR, 1H-NMR, 13C-NMR, FAB-MS, EI-HRMS spectra and elemental analyses. All the newly synthesized compounds were tested for in vitro activity against certain strains of bacteria such as Staph. aureus, Staph. saprophyticus, Escherichia coli and Bacillus cereus. Most of the tested new compounds exhibited promissing antibacterial activity. Some of them showed antibacterial activity more significant than the reference drugs. Compounds 6-10, 33, 36 and 39 were the most potent derivatives.
Research Authors
Alaa M Hayallah, Ibrahim M Sayed
Research Journal
BULLETIN OF PHARMACEUTICAL SCIENCES
Research Pages
117-128
Research Publisher
ASSIUT UNIV, FAC PHARMACY
Research Rank
2
Research Vol
36 Part 2
Research Website
NULL
Research Year
2013

Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
There is mounting evidence that Acinetobacter baumannii has a naturally occurring carbapenemase gene intrinsic in this species. Presence of class 1 integrase gene in Acinetobacter isolates is a useful marker for causing outbreaks in hospitals and for being epidemic strains of A. baumannii. The goal of the present study was to detect the resistance and outbreak marker genes by multiplex polymerase chain reaction (PCR) (blaOXA-51-like gene and class 1 integrase gene). Also to detect the correlation between imipenem susceptibility and detection of blaOXA-51-like gene. For these purposes, 51 consecutive, non-duplicate, A. baumanii strains were isolated from various clinical and environmental specimens from the Intensive Care Units (ICUs) of Assiut University Hospitals, Egypt. All the isolates were identified by conventional standard methods. The antibiotic sensitivity pattern was determined by Kirby Bauer disc diffusion method. For imipenem, the minimum inhibitory concentrations (MICs) were determined using Epsilometer (E test). Multiplex PCR was performed for the detection of the blaOXA-51-like and Class I integrase genes. The blaOXA-51-like gene was detected in (95.8%) and (96.3%) in clinical and environmental isolates, respectively. Class I integrase gene was detected in (75%) and (70.3%) in clinical and environmental isolates, respectively with statistically significant difference (P value of clinical samples = 0.041 and P value of environmental samples =0.011). This means that these strains have metallo-beta-lactamase (MBL) gene (cause outbreak in hospital at any time). Also (67.35%) of A. baumanii isolates are imipenem sensitive and positive for blaOXA-51-like gene and this means that these isolates contain hidden metallo beta lactamase MBL gene. Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals (PDF Download Available). Available from: https://www.researchgate.net/publication/264039110_Detection_of_outbreak_caused_by_multi-drug_resistant_Acinetobacter_baumannii_in_Assiut_University_Hospitals [accessed Apr 16, 2016].
Research Authors
Enas A Daef, Ismail S Mohamed, Ahmed S Ahmed, Sherein G El-Gendy, Ibrahim M Sayed
Research Journal
African Journal of Microbiology Research
Research Pages
2238-2244
Research Publisher
Academic Journals
Research Rank
1
Research Vol
Volume 8 -Issue 22
Research Website
DOI: 10.5897/AJMR2014.6795
Research Year
2014

Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
There is mounting evidence that Acinetobacter baumannii has a naturally occurring carbapenemase gene intrinsic in this species. Presence of class 1 integrase gene in Acinetobacter isolates is a useful marker for causing outbreaks in hospitals and for being epidemic strains of A. baumannii. The goal of the present study was to detect the resistance and outbreak marker genes by multiplex polymerase chain reaction (PCR) (blaOXA-51-like gene and class 1 integrase gene). Also to detect the correlation between imipenem susceptibility and detection of blaOXA-51-like gene. For these purposes, 51 consecutive, non-duplicate, A. baumanii strains were isolated from various clinical and environmental specimens from the Intensive Care Units (ICUs) of Assiut University Hospitals, Egypt. All the isolates were identified by conventional standard methods. The antibiotic sensitivity pattern was determined by Kirby Bauer disc diffusion method. For imipenem, the minimum inhibitory concentrations (MICs) were determined using Epsilometer (E test). Multiplex PCR was performed for the detection of the blaOXA-51-like and Class I integrase genes. The blaOXA-51-like gene was detected in (95.8%) and (96.3%) in clinical and environmental isolates, respectively. Class I integrase gene was detected in (75%) and (70.3%) in clinical and environmental isolates, respectively with statistically significant difference (P value of clinical samples = 0.041 and P value of environmental samples =0.011). This means that these strains have metallo-beta-lactamase (MBL) gene (cause outbreak in hospital at any time). Also (67.35%) of A. baumanii isolates are imipenem sensitive and positive for blaOXA-51-like gene and this means that these isolates contain hidden metallo beta lactamase MBL gene. Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals (PDF Download Available). Available from: https://www.researchgate.net/publication/264039110_Detection_of_outbreak_caused_by_multi-drug_resistant_Acinetobacter_baumannii_in_Assiut_University_Hospitals [accessed Apr 16, 2016].
Research Authors
Enas A Daef, Ismail S Mohamed, Ahmed S Ahmed, Sherein G El-Gendy, Ibrahim M Sayed
Research Journal
African Journal of Microbiology Research
Research Member
Research Pages
2238-2244
Research Publisher
Academic Journals
Research Rank
1
Research Vol
Volume 8 -Issue 22
Research Website
DOI: 10.5897/AJMR2014.6795
Research Year
2014

Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
There is mounting evidence that Acinetobacter baumannii has a naturally occurring carbapenemase gene intrinsic in this species. Presence of class 1 integrase gene in Acinetobacter isolates is a useful marker for causing outbreaks in hospitals and for being epidemic strains of A. baumannii. The goal of the present study was to detect the resistance and outbreak marker genes by multiplex polymerase chain reaction (PCR) (blaOXA-51-like gene and class 1 integrase gene). Also to detect the correlation between imipenem susceptibility and detection of blaOXA-51-like gene. For these purposes, 51 consecutive, non-duplicate, A. baumanii strains were isolated from various clinical and environmental specimens from the Intensive Care Units (ICUs) of Assiut University Hospitals, Egypt. All the isolates were identified by conventional standard methods. The antibiotic sensitivity pattern was determined by Kirby Bauer disc diffusion method. For imipenem, the minimum inhibitory concentrations (MICs) were determined using Epsilometer (E test). Multiplex PCR was performed for the detection of the blaOXA-51-like and Class I integrase genes. The blaOXA-51-like gene was detected in (95.8%) and (96.3%) in clinical and environmental isolates, respectively. Class I integrase gene was detected in (75%) and (70.3%) in clinical and environmental isolates, respectively with statistically significant difference (P value of clinical samples = 0.041 and P value of environmental samples =0.011). This means that these strains have metallo-beta-lactamase (MBL) gene (cause outbreak in hospital at any time). Also (67.35%) of A. baumanii isolates are imipenem sensitive and positive for blaOXA-51-like gene and this means that these isolates contain hidden metallo beta lactamase MBL gene. Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals (PDF Download Available). Available from: https://www.researchgate.net/publication/264039110_Detection_of_outbreak_caused_by_multi-drug_resistant_Acinetobacter_baumannii_in_Assiut_University_Hospitals [accessed Apr 16, 2016].
Research Authors
Enas A Daef, Ismail S Mohamed, Ahmed S Ahmed, Sherein G El-Gendy, Ibrahim M Sayed
Research Journal
African Journal of Microbiology Research
Research Pages
2238-2244
Research Publisher
Academic Journals
Research Rank
1
Research Vol
Volume 8 -Issue 22
Research Website
DOI: 10.5897/AJMR2014.6795
Research Year
2014

Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals

Research Abstract
There is mounting evidence that Acinetobacter baumannii has a naturally occurring carbapenemase gene intrinsic in this species. Presence of class 1 integrase gene in Acinetobacter isolates is a useful marker for causing outbreaks in hospitals and for being epidemic strains of A. baumannii. The goal of the present study was to detect the resistance and outbreak marker genes by multiplex polymerase chain reaction (PCR) (blaOXA-51-like gene and class 1 integrase gene). Also to detect the correlation between imipenem susceptibility and detection of blaOXA-51-like gene. For these purposes, 51 consecutive, non-duplicate, A. baumanii strains were isolated from various clinical and environmental specimens from the Intensive Care Units (ICUs) of Assiut University Hospitals, Egypt. All the isolates were identified by conventional standard methods. The antibiotic sensitivity pattern was determined by Kirby Bauer disc diffusion method. For imipenem, the minimum inhibitory concentrations (MICs) were determined using Epsilometer (E test). Multiplex PCR was performed for the detection of the blaOXA-51-like and Class I integrase genes. The blaOXA-51-like gene was detected in (95.8%) and (96.3%) in clinical and environmental isolates, respectively. Class I integrase gene was detected in (75%) and (70.3%) in clinical and environmental isolates, respectively with statistically significant difference (P value of clinical samples = 0.041 and P value of environmental samples =0.011). This means that these strains have metallo-beta-lactamase (MBL) gene (cause outbreak in hospital at any time). Also (67.35%) of A. baumanii isolates are imipenem sensitive and positive for blaOXA-51-like gene and this means that these isolates contain hidden metallo beta lactamase MBL gene. Detection of outbreak caused by multi-drug resistant Acinetobacter baumannii in Assiut University Hospitals (PDF Download Available). Available from: https://www.researchgate.net/publication/264039110_Detection_of_outbreak_caused_by_multi-drug_resistant_Acinetobacter_baumannii_in_Assiut_University_Hospitals [accessed Apr 16, 2016].
Research Authors
Enas A Daef, Ismail S Mohamed, Ahmed S Ahmed, Sherein G El-Gendy, Ibrahim M Sayed
Research Journal
African Journal of Microbiology Research
Research Pages
2238-2244
Research Publisher
Academic Journals
Research Rank
1
Research Vol
Volume 8 -Issue 22
Research Website
DOI: 10.5897/AJMR2014.6795
Research Year
2014
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