The present study was carried out to investigate the epidemiological and clinical status of bovine Theileriosis in the Aswan governorate. During a 2-year study, 265 cattle were clinically suspected upon careful clinical examination as Theileria annulata (T. annulata) infected animals. Conventional diagnosis based on blood and lymph smears
examinations showed that, the prevalence of Tropical Theileriosis in cattle in the Aswan governorate was 56 (21.13%). Stained blood smears showed the presence of macro and/or micro-schizonts inside lymphocytes (Koch’s blue bodies. Intraerythrocytic stages of Theileria annulata piroplasms inside RBCs. Polymerase chain reactions of T. annulata merozoite-piroplasms surface antigen Targeting gene: (Tams-1), revealed positive 29 (58%) animals confirmed by visualization of specific bands at 768 bp. Positive results could be detected in suspected cattle that showed positive or negative blood smear results that confirmed the high sensitivity of the
PCR technique compared with the conventional method for diagnosis of bovine tropical Theileriosis. PCR proved to be a highly sensitive and accurate method for the diagnosis of bovine tropical theileriosis, especially in the detection of samples that were negative on blood and lymph smears.
 

Background: Bovine besnoitiosis is a widespread disease caused by Besnoitia besnoiti with significant economic
losses in cattle production. There is a lack of knowledge about it in Egypt.
Aim: This study was conducted to detect the seroprevalence of B. besnoiti in cattle and to find out the presence of the
disease and the most important symptoms of besnoitiosis in cattle in Assiut Governorate, Egypt.
Methods: A total of 190 cattle from Assiut city and its different rural centers were examined clinically and serologically
for the presence of B. besnoiti. The serological examination was carried out by using the indirect enzyme-linked
immunosorbent assay (ELISA) kit in serum (ID.Vet Innovative Diagnostics Louis Pasteur. Grabeis, France). The
results were analyzed statistically using the chi-square test to assess the association between seroprevalence and
different parameters (age, sex, season, housing, and health status).
Result: Thirteen cattle were seropositive for B. besnoiti by ELISA and showed symptoms of besnoitiosis. Acute
symptoms included fever, tachycardia, edematous swellings of intermandibular space and limbs with polyarthritis,
diarrhea, ruminal atony, and enlarged lymph nodes. The chronic symptoms included cough, mastitis, exophthalmia,
cysts on the sclera and conjunctiva, nodules in the skin, and alopecia associated with tick infestation. The overall
seroprevalence of B. besnoiti was 22.1%. Regarding sex, the seroprevalence was higher for females 34.6% than for
males 6.97%. While, according to age susceptibility, the seroprevalence was highest (50.9%) with age ≥5 years,
followed by age >1 to <5 years (14.6%), and only one animal of age ≤1 year was recorded at 2.2%. Concerning seasonal
variations, the seroprevalence was highest in spring 42.9%, followed by autumn 29.3%, winter 13.6%, and summer
7.5%. Whereas, according to the housing system, it was 60% and 8.6% in farm and household rearing, respectively.
Depending on the health status, the seroprevalence was 21.6% of clinically healthy and 23.2% of clinically diseased
cattle.
Conclusion: The existence of B. besnoiti antibodies has been demonstrated in clinical and subclinical infected cattle
in Assiut Governorate, Egypt. The ELISA test is considered to be a good diagnostic method for detecting infection.
Furthermore, additional studies are essential to minimize and prevent the spread of infection.

Men with non-obstructive azoospermia constitute a challenging subgroup of male infertility patients in whom a genetic cause of defective spermatogenesis may be a contributing factor. The aim of this prospective observational cohort study was to determine whether assessment of meiotic nuclear division 1 (MND1) and glyc‑ eraldehyde-3-phosphate dehydrogenase (GAPDH) gene expression (MND1/GAPDH) in testicular tissue could be a prognostic indicator for sperm retrieval and ICSI outcome in patients with non-obstructive azoospermia. The study participants underwent clinical evaluation, conventional semen analysis, serum follicular stimulating hormone (FSH), testosterone assay, scrotal ultrasound examination, microsurgical testicular sperm extraction (mTESE), and assess‑ ment of MND1/GAPDH gene expression levels in testicular tissue via quantitative polymerase chain reaction (qPCR) techniques

Men with non-obstructive azoospermia constitute a challenging subgroup of male infertility patients in whom a genetic cause of defective spermatogenesis may be a contributing factor. The aim of this prospective observational cohort study was to determine whether assessment of meiotic nuclear division 1 (MND1) and glyc‑ eraldehyde-3-phosphate dehydrogenase (GAPDH) gene expression (MND1/GAPDH) in testicular tissue could be a prognostic indicator for sperm retrieval and ICSI outcome in patients with non-obstructive azoospermia. The study participants underwent clinical evaluation, conventional semen analysis, serum follicular stimulating hormone (FSH), testosterone assay, scrotal ultrasound examination, microsurgical testicular sperm extraction (mTESE), and assess‑ ment of MND1/GAPDH gene expression levels in testicular tissue via quantitative polymerase chain reaction (qPCR) techniques.

Microbial confrontation is ubiquitously present in nature, such as mycoparasitism, competition and antibiosis between biocontrol agents and microbial pathogens. However, the internal metabolic responses of fungal pathogens under microbial interaction scenario have been scarcely investigated. In this study, we set up an integrated mycotoxin analysis and non-targeted metabolomics workflow to decipher metabolic changes of Alternaria pathogens when confronted with selected Trichoderma strains, as well as mycotoxin metabolization in the Trichoderma spp. Results demonstrated that Trichoderma spp. significantly influenced mycotoxin production and whole metabolome of Alternaria pathogens when in cocultivation, and one Trichoderma strain could metabolize alternariol into its hydroxylated form. These differential metabolites revealed fungal physiological alternations in various confrontation conditions. In all, a MS-based strategy was proposed to investigate microbial metabolic profiles under fungal/fungal and fungal/mycotoxin cocultivation, and this generic methodology would be significant for understanding the occurrence and change of food contaminants in microbial interactions.

Precise quantification of microcystins (MCs) in freshwater is crucial for environmental monitoring and human health. However, the preparation of traditional multi-sample external calibration curve (MSCC) is time consuming and prone to error. Here, a novel one-point calibration strategy including one sample multi-point calibration curve (OSCC) and in sample calibration curve (ISCC) is proposed for the quantitation of eight MCs in freshwater lakes using liquid chromatography tandem mass spectrometry (LC-MS/MS). The multiple isotopologue reaction monitoring (MIRM) of MCs and its ¹⁵N-labelled internal standards were used for OSCC and ISCC, respectively. The isotopic abundance of each MIRM channel could be calculated and measured accurately. Additionally, this strategy was comprehensively validated and showed good performance in selectivity, sensitivity, accuracy and precision as the traditional MSCC. Interestingly, OSCC could realize sample dilution by monitoring the less abundant MIRM transitions, while ISCC remove blank matrixes and generate calibration curve in each study samples. Furthermore, the proposed methodology was successfully applied to analyze several freshwater lake samples contaminated by MCs. Considering the advantages of excluding the MSCC preparation, simplified workflows and improved throughput, OSCC and ISCC will be favored for MCs monitoring and as an emerging approach in environmental pollutant control and prevention.

Rotavirus ribonucleic acid was extracted from 16 fecal samples of the serologically positive diarrheic calves
using Latex agglutination test (LAT) and Immunochrmatographic assay (ICA). The extracted RNA was submitted to Reverse transcriptase polymerase chain reaction (RT-PCR) to detect VP7 and VP4 genes and the
positive samples were 100% (16/16) and 81.25% (13/16), respectively. The amplified products were subjected
to G and P-genotyping by semi-nested multiplex PCR using G6, G8 and G10 genotyping and P1, P5 and
P11 genotyping primers, respectively. G6 was detected in 10 (62.50%) of 16 samples and G10 was diagnosed
in 5 (31.25%) of 16 samples and one (6.25%) sample did not react with any G primer used. P5 was detected
in 9 (56.25%) of 16 samples, P11 was diagnosed in 3 (18.75%) of 16 samples, mixed infection with P5+P11
was observed in 1 (6.25%) of 16 samples and 3 (18.75%) samples did not react with any P primer used. G
and P genotypes combination revealed that G6P5 was in 50% (8/16), G10P11 in 12.50% (2/16), G10P5 in
6.25% (1/16), G6P11 in 6.25% (1/16), G10 (P5+P11) in 6.25% (1/16), G6P? in 6.25% (1/16), G10P? in 6.25%
(1/16), and G?P? in 6.25% (1/16). These results suggest that the detected genotypes can be used as dominant
strains for the formulation of an appropriate vaccine against BRV in the Assiut Governorate. In conclusion, RTPCR and Semi-nested multiplex PCR can be used as rapid and confirmatory tests for the detection of nucleic acid and genotypes of Rotavirus, G and P genotypes combination in the present study revealed that G6P5, G6P11, G10P5, and G10P11 were circulating genotypes in bovine population in Assiut governorate. G6P5 strain was the most common of all strains diagnosed in other fecal samples. The presence of various combinations of G
and P genotypes among field isolates of BRV suggests that genetic reassortment frequently occurred between
viral strains with genes encoding different G and P genotypes. Finally, the presence of different genotypes of
Rotaviruses emphasize their simultaneous monitoring of animals for the development and optimization of
Rotavirus vaccines.