Research Abstract
The response of animals to hypoxia is mediated by the hypoxia-inducible
transcription factor. Human hypoxia-inducible factor is regulated by four Fe(II)-
and 2-oxoglutarate-dependent oxygenases: prolyl hydroxylase domain enzymes 1–
3 catalyse hydroxylation of two prolyl-residues in hypoxia-inducible factor,
triggering its degradation by the proteasome. Factor inhibiting hypoxia-inducible
factor catalyses the hydroxylation of an asparagine-residue in hypoxia-inducible
factor, inhibiting its transcriptional activity. Collectively, the hypoxia-inducible
factor hydroxylases negatively regulate hypoxia-inducible factor in response to
increasing oxygen concentration. Prolyl hydroxylase domain 2 is the most
important oxygen sensor in human cells; however, the underlying kinetic basis of
the oxygen-sensing function of prolyl hydroxylase domain 2 is unclear. We report
analyses of the reaction of prolyl hydroxylase domain 2 with oxygen. Chemical
-2-
quench ⁄MS experiments demonstrate that reaction of a complex of prolyl
hydroxylase domain 2, Fe(II), 2-oxoglutarate and the C-terminal
oxygendependent degradation domain of hypoxia-inducible factor-a with oxygen
to form hydroxylated C-terminal oxygen-dependent degradation domain and
succinate is much slower (approximately 100-fold) than for other similarly studied
2-oxoglutarate oxygenases. Stopped flow⁄ UV-visible spectroscopy experiments
demonstrate that the reaction produces a relatively stable species absorbing at 320
nm; Mo¨ ssbauer spectroscopic experiments indicate that this species is likely not
a Fe(IV)=O intermediate, as observed for other 2-oxoglutarate oxygenases.
Overall, the results obtained suggest that, at least compared to other studied 2-
oxoglutarate oxygenases, prolyl hydroxylase domain 2 reacts relatively slowly
with oxygen, a property that may be associated with its function as an oxygen
sensor.
Research Authors
Emily Flashman, Lee M. Hoffart, Refaat B.
Hamed, J. Martin Bollinger Jr, Carsten Krebs,
Christopher J. Schofield